PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0215s00160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 697aa    MW: 77912.5 Da    PI: 4.3955
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0215s00160.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM127.98.2e-4041343128
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.....eekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                        +G+ F+Ptdeelv+ +Lk+k+ +++ ++ +v++++d++ vePw+ p+++++     +++ew+fFs+ + ky++++r +r+tksg+Wk tg+ 
  Vradi0215s00160.1   4 VGYGFRPTDEELVHSHLKHKLLDDDPRV-HVMTDIDLCAVEPWQVPEMLAKsvipfKNSEWFFFSPVKLKYSNSERFERTTKSGFWKPTGEP 94 
                        799**********************999.99***************5332235566889********************************* PP

                NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                        ++v ++ +++++g+kktLvfy gra+k++k++Wv+hey++
  Vradi0215s00160.1  95 RDVRTEdTNTVIGTKKTLVFYIGRASKAVKSNWVIHEYHA 134
                        ****98666779**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100544.0292152IPR003441NAC domain
PfamPF023652.8E-214133IPR003441NAC domain
SuperFamilySSF1019411.96E-434152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 697 aa     Download sequence    Send to blast
MEIVGYGFRP TDEELVHSHL KHKLLDDDPR VHVMTDIDLC AVEPWQVPEM LAKSVIPFKN  60
SEWFFFSPVK LKYSNSERFE RTTKSGFWKP TGEPRDVRTE DTNTVIGTKK TLVFYIGRAS  120
KAVKSNWVIH EYHALNSIQS QNAFVLCRLK KKPGKTTEGG TTALICVEEE SSRSVVSDNE  180
HQATAEGVPP GDTSNRMETI CQLTYQAEKN ISPAEQSLID IEQDEASFPN PSNDAYFRKE  240
INNRHIPYAQ TPFEPMHTSL GSTQNPFEAG SMLTLSEPTQ PSFETTKTPF ETMETPFDTR  300
ETLLGTMQSP LGAMQTPLGA MYTSIETTQT SLGYMLTPLE TTQPSFETIK TPFKTMETPF  360
DTMETLSGTL QSPMGAMYTS FETAQTSLGS MLTPLETTQP SFETIKTPFE TMETPFDTME  420
TLSGTMQTPL GAMYTSFETM QTSLGSMLTP FKTTQSSFET TNTPFETMET PLVAMVTPLG  480
AMYTSFETTQ TSLGSMLTPF ETTQTSFETS KSLETPFEII ETPFGAMQTP LGAMYTPPEM  540
MHPPSDLGSM QTPFGVTSPL ASRKIPFESR KIPFQYTHTP SQTPFEIPKS LKRAYCESTC  600
INPEVVLKLD ACIDDSSTMC TKYLNSDEYH SSKRFKTSYD VVDDDTDLLF SNQEASQKQE  660
SIFQDNLRGV ETSSCDSTVY NPEEINWNEI SSFPCT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B1e-27515220165NAC domain-containing protein 19
4dul_A1e-27515220165NAC domain-containing protein 19
1ut7_B1e-27515220165NO APICAL MERISTEM PROTEIN
1ut7_A1e-27515220165NO APICAL MERISTEM PROTEIN
1ut4_B1e-27515220165NO APICAL MERISTEM PROTEIN
1ut4_A1e-27515220165NO APICAL MERISTEM PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150371e-158AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014521569.10.0PREDICTED: uncharacterized protein LOC106778155
TrEMBLA0A0S3RVT50.0A0A0S3RVT5_PHAAN; Uncharacterized protein
STRINGGLYMA16G01930.11e-104(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.12e-37NAC domain containing protein 62